Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSELFSVPYFIENLKQHIEMNQSEDKIHAMNSYYRSVVSTLVQDQLTKNAVVLKRIQHLDEAYNKVKRGESK
2DN9 Chain:A ((23-64))----------------------------EIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEV--


General information:
TITO was launched using:
RESULT:

Template: 2DN9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 74 -9117 -123.20 -217.07
target 2D structure prediction score : 0.79
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : -123.20
2D Compatibility (Sec. Struct. Predict.) : 0.79
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.753

(partial model without unconserved sides chains):
PDB file : Tito_2DN9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2DN9-query.scw
PDB file : Tito_Scwrl_2DN9.pdb: