Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MSAFTLYPAIDMRNGKCVRLVQGDYNKETIYGDSPYDMAELFEKEGAEWIHLVDLDGAKEGKRVNDRHVIEIAQKLNLKVEIGGGIRSENDVYEYLSAGVERVILGSSAVSNPPFVKKMLKQYG-EKIAIGLDAR-----NGFVSTEGWLETSTLKATELGKELANEGAEVFIFTDIATDGMLSGPNVKSTVEL-AKETGKSVIASGGVSSVADLEALARNEADGVSGAIIGKALYTNQFTLSEALERVKRK 5AHF Chain:A ((2-240)) -----IIPALNLIDGTVVRL-------QRDYGNDPLPRLQDYAAQGAGVLHLVDLTGAKDPAKRQIPLIKTLVAGVNVPVQVGGGVRTEEDVAALLKAGVARVVIGSTAVKSPDVVKGWFERFGAQALVLALDVRIDEHGTKQVAVSGWQENSGVSLEQLVETYLPVGLKHVLCTDIS--------NVSLYEEVCARYPQIAFQSSGGIGDIDDIAAL---RGTGVRGVIVGRALLEGKFTVKEAIQ-----

General information: TITO was launched using: RESULT: Template: 5AHF.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1126 -50397 -44.76 -232.24 target 2D structure prediction score : 0.75 Monomeric hydrophicity matching model chain A : 0.77 3D Compatibility (PKB) : -44.76 2D Compatibility (Sec. Struct. Predict.) : 0.75 1D Compatibility (Hydrophobicity) : 0.77 QMean score : 0.622

(partial model without unconserved sides chains): PDB file : Tito_5AHF.pdb: (Unconserved sides chains are recalculated) : Sequence: align-5AHF-query.scw PDB file : Tito_Scwrl_5AHF.pdb: