Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGHYSHSDIEEAVKSAKKEGLKDYLYQEPHGKKRSHKKSHRTHKKSRSHKKSYCSHKKSRSHKKSFCSHKKSRSHKKSYCSHKKSRSHKKSYRSHKKSRSYKKSYRSYKKSRSYKKSCRSYKKSRSYKKSYCSHKKKSRSYKKSCRTHKKSYRSHKKYYKKPHHHCDDYKRHDDYDSKKEYWKDGNCWVVKKKYK
1U5T Chain:B ((454-473))--LISPMEMREACERFEHLGLN-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1U5T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 13 -903 -69.42 -45.13
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain B : 0.71

3D Compatibility (PKB) : -69.42
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.71
QMean score : 0.585

(partial model without unconserved sides chains):
PDB file : Tito_1U5T.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1U5T-query.scw
PDB file : Tito_Scwrl_1U5T.pdb: