Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKMTNNTVLITGGSAGIGLELAKRLLELGNEVIICGRSEARLAEAKQQLP----NIHTKQCDVADRSQREALYEWALKEYPNLNVLVNNAGIQKEI-DFKKGTEELFVDGDEIELNFQAPVHLSALFTPHLMKQPEAAIVQVTSGLAFNPLAVYPVYCATKAALHSFSLTLRHQLRDTSVEVIEMAPPMVDTGLNQKSRDKQGLTYRGISSEEYVQYFLDGLKEGKQEITNERVEGLRDATRADYDRLFEQMNTQEN
3O4R Chain:A ((13-204))--LANKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVATLQGEGLSVTGTVCHVGKAEDRERLVATAVKLHGGIDILVSNAAVNPFFGSIMDVTEEVW--DKTLDINVKAPALMTKAVVPEMEKRGGGSVVIVSSIAAFSPSPGFSPYNVSKTALLGLTKTLAIELAPRNIRVNCLAPGLIKTSFSR-------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3O4R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 977 -54636 -55.92 -292.17
target 2D structure prediction score : 0.72
Monomeric hydrophicity matching model chain A : 0.75

3D Compatibility (PKB) : -55.92
2D Compatibility (Sec. Struct. Predict.) : 0.72
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.535

(partial model without unconserved sides chains):
PDB file : Tito_3O4R.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3O4R-query.scw
PDB file : Tito_Scwrl_3O4R.pdb: