Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKRMLDVLMLVIGAFFFALAVNLFAIPNDLGEGGVTGITLILYYLFQWSPGVTNFILNAFLLLIGYKFLDGKTTVYTIIAVAANSLFLHLTHGWSIPSDELIINTIFAGVFAGVGIGMIIRVGGTTAGSAILARIANKYLDWNISYALLFFDLIVVFSSYFIIGAEKMMFTIVMLYIGTKVMDFIIEGLNTKKAITVISEN--KSEIAEQVNTLMDRGVTILSGKGNYTG---QSKEILYIVINKQELSMLKKIIRSCDK-----KAFVIVHDVRDVFGEGFVDISK
2GW8 Chain:A ((3-102))--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KIEAIVKPFKLDDVREALTEIGITGMTVSEVKGFGR-VDFLPKIKIELVLADDAVERAIDVIVEVARSGKIGDGKIFVLPVEEAIRI-------


General information:
TITO was launched using:
RESULT:

Template: 2GW8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 274 5547 20.24 72.99
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain A : 0.42

3D Compatibility (PKB) : 20.24
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.42
QMean score : 0.508

(partial model without unconserved sides chains):
PDB file : Tito_2GW8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2GW8-query.scw
PDB file : Tito_Scwrl_2GW8.pdb: