Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGKRFSSFQAAQIRIARPTGQLDEIIRFYEEGLCLKRIGEFSQHNGYDGVMFGLPHADYHLEFTQYEGGSTAPVPHPDSLLVFYVPNAVELAAITSKLKHMGYQEVESE-NPYWSNGGVTIEDPDGWRIVFMNSKGISGK
4HC5 Chain:A ((12-132))-----AYVHSATII----VSDQEKALDFYVNTLGFEKVFDNQLDPNMRFVTVVPPGAQTQVALGLPSWYEDGRKPGGYTGISLITRD---IDEAYKTLTERGVTFTKPPEMMPWGQRATWFSDPDGNQFFLVE-------


General information:
TITO was launched using:
RESULT:

Template: 4HC5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 485 -44728 -92.22 -372.73
target 2D structure prediction score : 0.73
Monomeric hydrophicity matching model chain A : 0.70

3D Compatibility (PKB) : -92.22
2D Compatibility (Sec. Struct. Predict.) : 0.73
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.507

(partial model without unconserved sides chains):
PDB file : Tito_4HC5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4HC5-query.scw
PDB file : Tito_Scwrl_4HC5.pdb: