Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMESHIYRIIKNKLTIIIFTII--ILIPCVDISLLLMTNTEYHPAYAFFLSGTSVGHASQMILLWFLPLYFLLLCADDSIQDYKTG----YHYILISKVGRKKYCLEKIFTSFIISFLTMFLSLILNFL---LVQVFFFKGTFKNDLD----QIKFPDNSLYTFSMAHPYIAIVLFSIICCIMSGFVGALGSSLSLLFRDKKYAYPASFF---IWFVLILKNKSLMFLFQPFTEYGYNVLLPILCLSIFIFLIII------------------SSIVLYEAKYNEN--------
1QXM Chain:A ((18-300))--TNANDLRNNEVFFISPSNNTNKVLDKISQSEVKLWNKLSGANQKWRLIYDTNKQAYKIKVMDNTSLILTWNAPLSSVSVKTDTNGDNQYWYLLQNYISRNVIIRNYMNPNLVLQYNIDDTLMVSTQTSSSNQFFKFSNCIYEALNNRNCKLQTQLNSDRFLSKNLNSQIIVLWQ--------WFDSSRQKWIIEYNETKSAYTLKCQENNRYLTWIQNSNNYVETYQSTDSLIQYWNINYLDNDASKYILYNLQDTNRVLDVYNSQIANGTHVIVDSYHGNTNQQWIINLI


General information:
TITO was launched using:
RESULT:

Template: 1QXM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1170 -75388 -64.43 -312.81
target 2D structure prediction score : 0.32
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : -64.43
2D Compatibility (Sec. Struct. Predict.) : 0.32
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.218

(partial model without unconserved sides chains):
PDB file : Tito_1QXM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1QXM-query.scw
PDB file : Tito_Scwrl_1QXM.pdb: