Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTDRIHVQPAHLRQAAAHHQQTADYLRTVPSSH--------DAIRESLDSLGPIFSELRDTGRELLELRKQCYQQQADNHADIAQNLRTSAAMWEQHERAASRSLGNIIDGSR
4U3W Chain:A ((67-158))
---------------AAHAAQKAGWRDTTPAQRAAWLHKIADGIEARFDEF--VAAEVADTGRPVAQARTLDIARGIANFRTFADLVRTASGEYFETHAADGSELINYV----
General information:
TITO was launched using:
RESULT:
Template:
4U3W.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9350 for 403 contacts (-23.2/contact) +
2D Compatibility (PS) -8759 + (NN) -208 + (LL) 944
1D Compatibility (HY) -2800 + (ID) 1150
Total energy: -21323.0 ( -52.91 by residue)
QMean score : 0.407
(partial model without unconserved sides chains):
PDB file :
Tito_4U3W.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4U3W-query.scw
PDB file :
Tito_Scwrl_4U3W.pdb
: