Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAIFGRWSARQRLRRATRESLTIPTFSSSLDCTTRVIGGLWPAELSSNTAETATLAEHLKADLHRIVGSANDELMVIWRAGMADSTRRAEEDRVIDRARASAMRRVESAMRELRQITGRVPVEIPRMRGAGGSDLDTTRLMPAVTVVQPADQACTDWPVAAAEDDEARLQRLLAFVARQEPRLNWAVGVHADGTTVLVTDVAHGWIPPGIALPEGVRLLAPARRAGRAPELVGITTCCKTYTPGDSLRRAVDSTAPTSSVQPRALPAIAGLSVELGIATQRHDGLPKIVHAMATAAGNGAAAEEVDLLRVHVDTALHHVLAQYPRVDPALLLNCMLLAATERSVTGDPIAANYHFAWFRELDSRR |
1KRW Chain:A ((23-80)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LAGAGLTCTTFENGNEVLAALASKTPDVLLSDIRMPGMDGLAL-LKQIKQRHPMLPVII---------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KRW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -8302 for 361 contacts (-23.0/contact) +
2D Compatibility (PS) -6134 + (NN) -2150 + (LL) 23584
1D Compatibility (HY) -4000 + (ID) 900
Total energy: 2098.0 ( 5.81 by residue)
QMean score : 0.119
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