Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFLAGVLCMCAAAASALFGSWSLCHTPTADPTALALRAMAPTQLAAAVMLAAGGVVAVAAPGHTALMVVIVCIAGAVGTLAAGSWQSAQYALRRETASPTANCVGSCA-VCTQACH
2NX7 Chain:A ((8-24))
--------------------------------------------------------------------------------------------------QQPGCSSACAPACRLSC-
General information:
TITO was launched using:
RESULT:
Template:
2NX7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8390 for 59 contacts (-142.2/contact) +
2D Compatibility (PS) -1629 + (NN) -283 + (LL) 8972
1D Compatibility (HY) -800 + (ID) 250
Total energy: -2380.0 ( -40.34 by residue)
QMean score : 0.332
(partial model without unconserved sides chains):
PDB file :
Tito_2NX7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2NX7-query.scw
PDB file :
Tito_Scwrl_2NX7.pdb
: