Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSSITVSVDPVDPVDPVDPVDPVDAVVAAGSDGLTVARIESEIGALEFLNELRTELKSGQFRPQPVRERKIPKPGGLGKVRRLGIPTVADRVVQAALKLVLEPIFET--DFEPVSYGFRPAR-RAHDTIAEIHLFGTQEYRWVLDADIKACFDRIDHADLMDRVRHRIK----DKR-VLRLVNWQRIRH-R-WNWTDVRRWLTDPTGR-WHPISADGITLFNPAAVPIRRYRYRGNTIPTPWTQAV |
| 1KHV Chain:A ((186-319)) | ------------------------------------------------------------------------------KKRLLWGCDVGVAVCAAAVFHNICYKLKMVARFGPIAVGVDMTSRDVDVII----NNLTSKASDFLCLDYSKW-DSTMSPCVVRLAIDILADCCEQTELTKSVVLTLKSHPMTILDAMIVQTKRGLPSGMPFTSV-INSI---------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KHV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 10905 for 706 contacts (15.4/contact) +
2D Compatibility (PS) -13050 + (NN) -6867 + (LL) 5952
1D Compatibility (HY) -3200 + (ID) 1000
Total energy: -7260.0 ( -10.28 by residue)
QMean score : 0.026
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