Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSVYKHAPSRVRLRQTRSTVVKGRSGSLSWRRVRTGDLGLAVWGGREEYRAVKPGTPGIQPKGDMMTVTVVDAGPGRVSRSVEVAAPAAELFAIVADPRRH-RELDGSGTVRGNIKVPAKLVVGSKFSTKMKLFGLPYRITSRVTALKPN-ELVEWSH----PLG-----HRWRWEFESLSPTLTRVTETFDYHAAGAIKNGLKFYEMTGFAKSNAAGIEATLAKLSDQYARGRA |
4M9B Chain:A ((4-154)) | ---------------------------------------------------------------------------FTFEDEITSTVPPAKLYNAMKDADSITPKIIDD--VKSVEIVEGNGGPGTIKKLTIVEDGETKFILHKVESIDEANYAYNYSVVGGVALPPTAEKITFETKLVEGPNGGSIGKLTLKYHTKGDAK-----PDEE-ELKKGKAKGEGLFRAIEGYVLANP- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4M9B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -23173 for 959 contacts (-24.2/contact) +
2D Compatibility (PS) -15375 + (NN) -4336 + (LL) 3740
1D Compatibility (HY) -400 + (ID) 1000
Total energy: -40544.0 ( -42.28 by residue)
QMean score : 0.409
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