Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRDRILAAVCDVLYIDEADLIDGDETDLRDL-GLDSVRFVLLMKQL----GVNRQSELPSRLAANPSIAGWLRELEAVCTEFG
2LML Chain:A ((4-78))
-LDALTPIFRQVFDDDSIVLT--RETSANDIDAWDSLSHMNLIVSLEVHYKIK--FALG-ELQKLKNVGDLADLVDKKLAR--
General information:
TITO was launched using:
RESULT:
Template:
2LML.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37581 for 444 contacts (-84.6/contact) +
2D Compatibility (PS) -7629 + (NN) -4428 + (LL) 112
1D Compatibility (HY) -3600 + (ID) 650
Total energy: -53776.0 ( -121.12 by residue)
QMean score : 0.592
(partial model without unconserved sides chains):
PDB file :
Tito_2LML.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LML-query.scw
PDB file :
Tito_Scwrl_2LML.pdb
: