Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAGSVSAAAGIGWVGLNVTETNRDQCYRVERTTVDALTHPEYRVHTRGVQRVRVTRNARKHRVSKHRIVAAMRHCGVPVIQEDGSLYYQGRDTSGRLTEVVAVEADDGDLIITHAMPKEWKR |
2LY8 Chain:A ((77-111)) | ---------------------------------------LKSFLESVIRDSVTYTEHAKRKTVTSLDVVYALKR------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2LY8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 5512 for 192 contacts (28.7/contact) +
2D Compatibility (PS) -3577 + (NN) 639 + (LL) 5468
1D Compatibility (HY) -2000 + (ID) 300
Total energy: 5742.0 ( 29.91 by residue)
QMean score : 0.242
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