Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSNRIVLEPSADHPITIEPTNRRVQVRVNGEVVADTAAALCLQEASYPAVQYIPLADVVQDRLIRTETSTYCPFKGEASYYSVTTDAGDIVDDVMWTYENPYPAVAAIAGHVACYPDKAEISIFPG
4B7N Chain:A ((246-289))
------------------------------------------------------------------------PSDGQASYKIFRIEKGKIVKSVEMNAPNYHYE------ECSCYPDSSEIT----
General information:
TITO was launched using:
RESULT:
Template:
4B7N.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7717 for 168 contacts (-45.9/contact) +
2D Compatibility (PS) -4382 + (NN) -290 + (LL) 6484
1D Compatibility (HY) -2000 + (ID) 800
Total energy: -8705.0 ( -51.82 by residue)
QMean score : 0.058
(partial model without unconserved sides chains):
PDB file :
Tito_4B7N.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4B7N-query.scw
PDB file :
Tito_Scwrl_4B7N.pdb
: