Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRSIDVVVEAVVTFAGAAGFAHTLAPLRRGQQDPCFRVPGDGTIWRTSLLPTGPVTARISRAGRDAARCVAWGSGAEEFVDMAPAMLGAADDASDFVPL---HPAVAAAHRRLPNLRLGRTGQVLEALIPAVIEQRVPGADAFRSWRLLVSKYGTQAPGPAPPGMRVPPSAEVWRHIPSWEFHRANVDPGRARAVVGCAQRAAS----LERLVSLPAARAAEALTSLPGVGVWTAAETTQRVFGDADAVSVGDYHIPKMIGWTLVGR-PVDDAGMLELLEPMRPHRHRVVRLLEASGLAREPRRGPRLPVQNIRAL |
2H56 Chain:A ((2-202)) | ------------------------------------------------------------------------------------RYFSTD--SPEVKTIVAQDSRLFQFIEIAGEVQLPTKPNPFQSLVSSIVEQQLSIKAASAIYGRVEQLVGGA-----------LEKPEQLYRVSDEALRQAGVSKRKIEYIRHVCEHVESGRLDFTELEGAEATTVIEKLTAIKGIGQWTAEMFMMFSLGRLDVLSVGDVGLQRGAKWLYGNGEGDGKKLLIYHGKAWAPYETVACLYLWKAAG------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2H56.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -64335 for 1404 contacts (-45.8/contact) +
2D Compatibility (PS) -19475 + (NN) -1716 + (LL) 5588
1D Compatibility (HY) -4400 + (ID) 1250
Total energy: -85588.0 ( -60.96 by residue)
QMean score : 0.336
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