Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTELDDVSSLPSSRRTAGDTWAITESVGATALGVAAARAVETAATNPLIRDEFAKVLVSSAGTAW-----------ARLADADLAWLDGDQLGRRVHRVACDYQAVRTHFFDEYFGAAVD-AGVRQVVILAAGLDARAYRLNW-PAGTVVYEIDQPSVLEYKAGILQSHGA------------------VPTARRHAVAVDLRD-DWPAALIAAGFDGTQPTAWLAEGLLPYLPGDAADRLFDMVTALSAPGSQVAVEAFTM---NTKGNTQRWNRMRERLGLDIDVQALTYHEPDRSDAAQWLATHGWQVHSVSNREEMARLGRAIPQDLVDETVRTTLLRGRLVTPAQPA |
| 1RJD Chain:A ((3-252)) | ------------------------RIIQQTDYDALSCKLAAISV--GYLPSSGLQRLSVDLSKKYTEWHRSYLITLKKFSRRAFGK--VDKAMRSSFPVMNYGTYLRTVGIDAAILEFLVANEKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDYNESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAACDLNDITETTRLLDVCTKREIPTIVISECLLCYMHNNESQLLINTIMSKFSHGLWISYDPIGGSQPNDRFGAIMQSNLK-------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1RJD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -88833 for 1573 contacts (-56.5/contact) +
2D Compatibility (PS) -22983 + (NN) -3655 + (LL) 6736
1D Compatibility (HY) -7200 + (ID) 1850
Total energy: -117785.0 ( -74.88 by residue)
QMean score : 0.332
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