Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAFPRTLAILAAAAALVVACSHGGTPTGSSTTSGASPATPVAVPVPRSCAEPAGIPALLSPRDKLAQLLVVGVRDAADAQAVVTNYHVGGILIGSDTDLTIFDGALAEIVAGGGPLPLAVSVDEEGGRVSRLRSLIGGTGPSAR-ELAQTRTVQQVRDLARDRG----RQMRKLGITIDFAPVVDVTDAPDDTVIGDRSFGSDPATVTAYAGAYAQGLRDAGVLPVLKHFPGHGRGSGDSHNGGVTTPPLDD--LVGDDLVPYRTLVTQAPVGVMVGHLQVPGLTGSEPASLSKAAVN-LLRTGTGYGAPPFDGPVFSDDLSGMAAISDRFGVSEAVLRTLQAGADIALWVTTKEVPAVLDRLEQALRAGELPMSAVDRSVVRVATMKGPNPGCGR |
3SQL Chain:A ((84-349)) | -------------------------------------------------------------------------------------------------------------------IPLLIAADIEEGVGQRFRGATEFPPPMAFGEIWRTDPHQAIA-LAETMGATTAQEALSLGINWVLAPVLDVNNNPHNPVINIRAFGETPDQVSALGTAFIRGAQQYAVLTTAKHFPGHGDTATDSH-LALPTISHDDTRLNTVELPPFKAAIQGGVDAVMNAHLMIPAWDQQYPATLSPAILTGQLRHKLG-----FKGLIVTDALV-MGGITQFAAPDTVVVQAIAAGADILL--MPPDVDGAIIAIETAIKTGQLSESRIYESVERIWQAK-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SQL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -60048 for 2227 contacts (-27.0/contact) +
2D Compatibility (PS) -27824 + (NN) -15517 + (LL) 5464
1D Compatibility (HY) -13200 + (ID) 4400
Total energy: -115525.0 ( -51.87 by residue)
QMean score : 0.427
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