Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTLLNDIQVWTTACAYDHLIPGRGVGVLLDDGSQVALFRL-DDGSVHAVGNVDPFSGAAVMSRGIVGDRGGRAMVQSPILKQAFALDDGSCLDDPRVSVPVYPARVTPEGRIQVARVAV
2JO6 Chain:A ((1-109))
------MSQWKDICKIDDILPETGVCALL-GDEQVAIFRPYHSDQVFAISNIDPFFESSVLSRGLIAEHQGELWVASPLKKQRFRLSDGLCMEDEQFSVKHYEARVKD-GVVQLRGG--
General information:
TITO was launched using:
RESULT:
Template:
2JO6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -67359 for 804 contacts (-83.8/contact) +
2D Compatibility (PS) -11890 + (NN) -7300 + (LL) 820
1D Compatibility (HY) -10800 + (ID) 2150
Total energy: -98679.0 ( -122.74 by residue)
QMean score : 0.341
(partial model without unconserved sides chains):
PDB file :
Tito_2JO6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JO6-query.scw
PDB file :
Tito_Scwrl_2JO6.pdb
: