Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSDVLIRDIPDDVLASLDAIAARLGLSRTEYIRRRLAQDAQTARVTVTAADLRRLRGAVAGLGDPELMRQAWR
2MDV Chain:A ((2-38))
--WLCIW-LSDQTLEDLEKMARREGLSKSEMINVALQHYK---------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2MDV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -14207 for 188 contacts (-75.6/contact) +
2D Compatibility (PS) -4376 + (NN) -2001 + (LL) 2904
1D Compatibility (HY) -3600 + (ID) 600
Total energy: -21880.0 ( -116.38 by residue)
QMean score : 0.751
(partial model without unconserved sides chains):
PDB file :
Tito_2MDV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2MDV-query.scw
PDB file :
Tito_Scwrl_2MDV.pdb
: