Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MHHSFAYRSYSWYVDVDNLPQLPWWLRPFARFHADDHFADPFSCPPHSSLRDRLDAFFAARGLAVPDGRITALLQARVLGYVFNPLSIFWCHDRDGQLRHVIAEVHNTYGGRHAYLLPPADLPVVTAKNFYVSPFHQLAGYYLIRAPRPDRELDVTVTLHRDRRQVCPEFTATLRGQRRPATTRQIAMMQIISPLAPMVVAARIRIQGIRL------WLRRVPVVPR- |
4MT5 Chain:A ((0-183)) | M-----QTAYVKYVDDTTGE----------TLRQDDLHGYTDETIPYST-AEGIKKYEGDGYVLVSDG--------------FKPGTKFGVGTPTYEVHFKHGMTHTDATDKNA------EQKTVTETIHYVDENNQ--------TVQPDSTTAVTFKRGYTTDNVTGKVVSYDPWTVDGNQADSKTFAAVPSPAVEGYTPNHQQINEFTVTPDSKDIVKTVVYVGDP |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MT5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -4186 for 1132 contacts (-3.7/contact) +
2D Compatibility (PS) -18495 + (NN) -3468 + (LL) 4208
1D Compatibility (HY) 11600 + (ID) 400
Total energy: -10741.0 ( -9.49 by residue)
QMean score : -0.099
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