Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLMRTWIPLVILVVVIVGG-FTVHRIRGFFGSENRPSYSD---TNLENSKPFNPKHLTYEIFGPPGTVADISYFDVNSEPQRVDGAVLPWSLHITTNDAAVMGNIVAQGNSDSIGCRITVDGKVRAERVSNEVNAYTYCLVKSA----
1F46 Chain:A ((6-144))
---RKEAVIIMNVAAHHGSELNGELLLNSIQQAGFIFGDMNIYHRHLSPDGSGPALFSLANMVKPGT------FDPEMKDFTTPGVTIFMQVPSYGDELQLFKLMLQSAQHIADEVGGVVLDDQRRMMTPQKLREYQDIIREVKDANA
General information:
TITO was launched using:
RESULT:
Template:
1F46.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -57866 for 935 contacts (-61.9/contact) +
2D Compatibility (PS) -13811 + (NN) -2884 + (LL) 1120
1D Compatibility (HY) -400 + (ID) 650
Total energy: -74491.0 ( -79.67 by residue)
QMean score : 0.103
(partial model without unconserved sides chains):
PDB file :
Tito_1F46.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1F46-query.scw
PDB file :
Tito_Scwrl_1F46.pdb
: