Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIRIGTRGSLLATTQAATVRDALIAG--GHSAELVTISTEGDRSMAPIASLGVGVFTTALREAMEAGLVDAAVHSYKDLPTAADPRFTVAAIPPRNDPRDAVVARD---GLTLGELPVGSLVGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLNKV-SSGDLDAIVVARAGLARLGRLDDVTETLEPVQMLPAPAQGALAVECRAGDSRLVAVLAELDDADTRAAVTAERALLADLEAGCSAPVGAIAEVVESIDEDGRVFEELSLRGCVAALDGSDVIRASGIGSCGRARELGLSVAAELFELGARELMWGVRH |
| 3EQ1 Chain:B ((20-299)) | VIRVGTRKSQLARIQTDSVVATLKASYPGLQFEIIA-------------------FTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTLETLPEKSVVGTSSLRRAAQLQRKFPHLEFRSIQGNLNTRLRKLDEQQEFSAIILATAGLQRMGWHNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRHLEGGCSVPVA-----VHTAMKDGQLY----LTGGVWSLDGSDSIQET--------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EQ1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -87394 for 1953 contacts (-44.7/contact) +
2D Compatibility (PS) -27683 + (NN) -19341 + (LL) 4416
1D Compatibility (HY) -20000 + (ID) 5750
Total energy: -155752.0 ( -79.75 by residue)
QMean score : 0.483
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