Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSGTSSMGL-----PPGPRLSGSVQAVLMLRHGL-RFLTACQRRYGSVFTLHVAGFGHMVYLSDPAAIKTVFAGNP-SVFHAGEANSMLAGLLG--DSSLLLIDDDVHRDRRRLMSPPFHRDAVARQAGPIAEIAAANIAGW----PMAKAFAVAPKMSEITLEVILRTVIGAS--------DPV-----RLAALRKVMPRLLNVGPWA----TLALANPSLLNNRLWSRLRRRIEEADALLYAEIADRRADPDLAARTDTLAMLVRAADEDGRTMTERELRDQLITLLVAGHDTTATGLSWALERLTRHPVTLAKAVQAADASAAGD--PAGD-----EYLDAVAKETLRIRPVVYDVGRVLTEAVEVAGYRLPAGVMV-VPAIGLVHASAQLYPDPERFDPDRMVGA---TLSPTTWLPFGGGNRRCLGATFAMVEMRVVLREILRRVELSTTTTSGERPKLKHVIMVPHRGARIRVRATRDVSATSQATAQGAGCPAARGGGPSRAVGSQ |
| 5A1R Chain:A ((6-446)) | --GTHSHGLFKKLGIPGPTPLPFLGNILSYHKGFCMFDMECHKKYGKVWGFY-DGQQPVLAITDPDMIKTVLVKECYSVF----TNRRPFGPVGFMKSAISIAEDEEWKRLRSLLSPTFTSGKLKEMVPIIAQYGDVLVRNLRREAETGKPVTLKDVFGAYSMDVITSTSFGVNIDSLNNPQDPFVENTKKLLRFDFLDPFFLSITVFPFLIPILEVLNICVFPREVTNFLRKSVKR--------MKESRLE-----RVDFLQLMIDSQN-SHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYAL-HRDPKYWTEPEKFLPERFSKKNKDNIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFK------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 5A1R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -230583 for 2993 contacts (-77.0/contact) +
2D Compatibility (PS) -42112 + (NN) -19435 + (LL) 4736
1D Compatibility (HY) -33200 + (ID) 5650
Total energy: -326244.0 ( -109.00 by residue)
QMean score : 0.479
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