Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVIDTSALVAMLSDEPDA-ERFEAAVEADHIRLMSTASYLETALVIEARFGEPG-GRELDLWLHRAAVDLVAVHADQADAARAAYRTYGKGRHRAGLNYGDCFSYGLAKISGQPLLFKG-EDFQHTDIATVALP
3ZVK Chain:A ((3-131))
YMLGTNICVYAINKHPDSYYNNLELLAKNNTIAISSIVLAELQYGVSKSKKKEQNQSKLDIFL--SRLEIIDFSAKCTFYYGELRTELEQKGL--IIGNNDLLIASHAIAENATLVTNNIKEFKRIPNLILEN-
General information:
TITO was launched using:
RESULT:
Template:
3ZVK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -51339 for 900 contacts (-57.0/contact) +
2D Compatibility (PS) -13522 + (NN) -4226 + (LL) 248
1D Compatibility (HY) -4800 + (ID) 700
Total energy: -74339.0 ( -82.60 by residue)
QMean score : 0.348
(partial model without unconserved sides chains):
PDB file :
Tito_3ZVK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZVK-query.scw
PDB file :
Tito_Scwrl_3ZVK.pdb
: