Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAKRLDLTDVNIYYGSFHAVADVSLAILPRSVTAFIGPSGCGKTTVLRTLNRMHEVIPGARVEGAVLLDDQDI-YAPGIDPVGVRRAIGMVFQRPNPFPAMSIRNNVVAGLKLQGVRNRKVLDDTAESSLRGANLWDEVKDRLDKPGGGLSGGQQQRLCIARAIAVQPDVLLMDEPCSSLDPISTMAIEDLISELKQQY--TIVIVTHNMQQAARVSDQTAFFNLEAVGKPGRLVEIASTEKIFSNPNQKATEDYISGRFG
1V43 Chain:A ((15-249))------LENLTKRFGNFTAVNKLNLTIKDGEFLVLLGPSGCGKTTTLRMIAGLEE-----PTEGRIYFGDRDVTYLPPKD-----RNISMVFQ------HMTVYENIAFPL-------KKFPKDEIDKRVRWAAELLQIEELLNRYPAQLSGGQRQRVAVARAIVVEPDVLLMDEPLSNLDAKLRVAMRAEIKKLQQKLKVTTIYVTHDQVEAMTMGDRIAVMN------RGQLLQIGSPTEVYLRPNSVFVATFI-----


General information:
TITO was launched using:
RESULT:

Template: 1V43.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -136815 for 1746 contacts (-78.4/contact) +
2D Compatibility (PS) -24005 + (NN) -12531 + (LL) 1516
1D Compatibility (HY) -19200 + (ID) 4150
Total energy: -195185.0 ( -111.79 by residue)
QMean score : 0.508

(partial model without unconserved sides chains):
PDB file : Tito_1V43.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1V43-query.scw
PDB file : Tito_Scwrl_1V43.pdb: