Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNILSRIFARTPSLRTRVVVATAIGAAIPVLIVGTVVWVGITNDRKERLDRRLDEAAGFAIPFVPRGLDEIPRSPNDQDALITVRRGNVIKSNSDITLPKLQDDYADTYVRGVRYRVRTVEIPGPEPTSVAVGATYDATVAETNNLHRRVLLICTFAIGAAAVFAWLLAAFAVRPFKQLAEQTRSIDAGDEAPRVEVHGASEAIEIAEAMRGMLQRIWNEQNRTKEALASARDFAAVSSHELRTPLTAMRTNLEV----LSTLDLPDDQRKEVLNDVIRTQSR----IEATLSALERLAQGELSTSDDHVPVDITDLLDRAAHDAARIYPDLDVSL-----VPSPTCIIVGLPAGLRLAVDNAIANAVKHGGA----TLVQLSAVSSRAGVEIAIDDNGSGVPEGERQVVFERFSR-GSTASHSGSGLGLALVAQQAQLHGGTASLENSPLGGARLVLRLPGPS |
2C2A Chain:A ((9-246)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ELERLKRIDRMKTEFIANISHELRTPLTAIKAYAETIYNSLGELDLS--TLKEFL-EVIIDQSNHLENLLNELLDFSRLERKSLQINRE--KVDLCDLVESAVNAIKEFASSHNVNVLFESNVPCPVEAYID-PTRIRQVLLNLLNNGVKYSKKDAPDKYVKVILDEKDGGVLIIVEDNGIGIPDHAKDRIFEQFYRVD-------TGLGLAITKEIVELHGGRIWVESEVGKGSRFFVWIP--- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2C2A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -78360 for 1429 contacts (-54.8/contact) +
2D Compatibility (PS) -22969 + (NN) -13149 + (LL) 16848
1D Compatibility (HY) -14400 + (ID) 3600
Total energy: -115630.0 ( -80.92 by residue)
QMean score : 0.551
|
|
|