Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNILSRIFARTPSLRTRVVVATAIGAAIPVLIVGTVVWVGITNDRKERLDRRLDEAAGFAIPFVPRGLDEIPRSPNDQDALITVRRGNVIKSNSDITLPKLQDDYADTYVRGVRYRVRTVEIPGPEPTSVAVGATYDATVAETNNLHRRVLLICTFAIGAAAVFAWLLAAFAVRPFKQLAEQTRSIDAGDEAPRVEVHGASEAIEIAEAMRGMLQRIWNEQNRTKEALASARDFAAVSSHELRTPLTAMRTNLEV----LSTLDLPDDQRKEVLNDVIRTQSR----IEATLSALERLAQGELSTSDDHVPVDITDLLDRAAHDAARIYPDLDVSL-----VPSPTCIIVGLPAGLRLAVDNAIANAVKHGGA----TLVQLSAVSSRAGVEIAIDDNGSGVPEGERQVVFERFSR-GSTASHSGSGLGLALVAQQAQLHGGTASLENSPLGGARLVLRLPGPS
2C2A Chain:A ((9-246))---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ELERLKRIDRMKTEFIANISHELRTPLTAIKAYAETIYNSLGELDLS--TLKEFL-EVIIDQSNHLENLLNELLDFSRLERKSLQINRE--KVDLCDLVESAVNAIKEFASSHNVNVLFESNVPCPVEAYID-PTRIRQVLLNLLNNGVKYSKKDAPDKYVKVILDEKDGGVLIIVEDNGIGIPDHAKDRIFEQFYRVD-------TGLGLAITKEIVELHGGRIWVESEVGKGSRFFVWIP---


General information:
TITO was launched using:
RESULT:

Template: 2C2A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -78360 for 1429 contacts (-54.8/contact) +
2D Compatibility (PS) -22969 + (NN) -13149 + (LL) 16848
1D Compatibility (HY) -14400 + (ID) 3600
Total energy: -115630.0 ( -80.92 by residue)
QMean score : 0.551

(partial model without unconserved sides chains):
PDB file : Tito_2C2A.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2C2A-query.scw
PDB file : Tito_Scwrl_2C2A.pdb: