Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPTGSVTVRV--PGKVNLYLAVGDRREDGYHELTTVFHAVSLVDEVTVRNADVLSLEL-VGEGADQLPTDERNLAWQAAELMAEHVGRAPDVSIMIDKSIPVAGGMAGGSADAAAVLVAMNSLWELNVPRRDLRMLAARLGSDVPFALHGGTALGTGRGEELATVLSRNTFHWVLAFADSGLLTSAVYNELDRLREVGDPPRLGEPGPVLAALAAGDPDQLAPLLGNEMQAAAVSLDPALARALRAGVEAGALAGIVSGSGPTCAFLCTSASSAIDVGAQLSGAGVCRTVRVATGPVPGARVVSAPTEV
2VF3 Chain:A ((3-267))-----HMIKVLSPAKINLGLWVLGRLPSGYHEILTLYQEIPFYDEIYIREG-VLRVETNIG-----IPQEE-NLVYKGLREFERITGIEINYSIFIQKNIPPGAGLGGGSSNLAVVLKKVNELLGSPLSEEELRELVGSISADAPFFLLGKSAIGRGKGEVLEPVETEISGKITLVIPQVSSSTGRVYSSLREEHFV--TPEYAEEK--IQRIISGEVEEIENVLGD----IARELYPEINEVYRF-VEYLGFKPFVSGSGSTVYFFG-GASEELKKAAKMRGWKVV----------------------


General information:
TITO was launched using:
RESULT:

Template: 2VF3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -162785 for 2180 contacts (-74.7/contact) +
2D Compatibility (PS) -29828 + (NN) -20320 + (LL) 1676
1D Compatibility (HY) -20400 + (ID) 4200
Total energy: -235857.0 ( -108.19 by residue)
QMean score : 0.433

(partial model without unconserved sides chains):
PDB file : Tito_2VF3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2VF3-query.scw
PDB file : Tito_Scwrl_2VF3.pdb: