Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRTTLTLDDDVVRLVEDAVHRERRPMKQVINDALRRALAPPVK-RQEQYRLEPHESAVRSGLDLAGFNKLADELEDEALLDATRRAR
4TYA Chain:A ((312-369))
--TMLVNGDDLVVICESAGTQEDAASLRVFTEAMTRYSAPPGDPPQPEYDLE-----------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4TYA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 930 for 213 contacts (4.4/contact) +
2D Compatibility (PS) -5049 + (NN) -450 + (LL) 2604
1D Compatibility (HY) -2000 + (ID) 900
Total energy: -4865.0 ( -22.84 by residue)
QMean score : 0.355
(partial model without unconserved sides chains):
PDB file :
Tito_4TYA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4TYA-query.scw
PDB file :
Tito_Scwrl_4TYA.pdb
: