Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNVTVSIPTILRPHTGGQKSVSASGDTLGAVISDLEANYSGISERLMDPSSPGK------LHRFVNIYVNDEDVRFSGGLATAIADGDSVTILPAVAGG
2L52 Chain:A ((4-99))
AEVKVKLFANLREAAG-TPELPLSGEKVIDVLLSLTDKYPALKYVIFEKG--DEKSEILILCGSINILINGNNIRHLEGLETLLKDSDEIGILPPVSGG
General information:
TITO was launched using:
RESULT:
Template:
2L52.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -69834 for 634 contacts (-110.1/contact) +
2D Compatibility (PS) -9901 + (NN) -2694 + (LL) -340
1D Compatibility (HY) -8400 + (ID) 1300
Total energy: -92469.0 ( -145.85 by residue)
QMean score : 0.408
(partial model without unconserved sides chains):
PDB file :
Tito_2L52.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2L52-query.scw
PDB file :
Tito_Scwrl_2L52.pdb
: