Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTAGSDLDDFRGLLAKAFDERVVAWTAEAEAQERFPRQLIEHLGVCGVFDAKWATDARPDVG-------KLVE-LAFALGQLASAGIGVGVSLHDS-AIAILRRFGKSDYLRDICDQAIRGAAVLCIGASEESGGSDLQIVETEIRSRDGGFEVRGVKKFVSLSPIADHIMVVARS-VDHDPTSRHGNVAVVAV--PAAQVSVQTPYRKVGAGPLDTAAVCI-DTWVPADALVARAGTGLAAISWGLAHERMSIAGQIAASCQRAIGITLARMMSRRQFGQTLFEHQALRLRMADLQARVDLLRYALHGIAE---QGRLELRTAAAVKVTAARLGEEVISECMHIFGGAGYLVDETTLGKWWRDMKLARVGGGTDEVLWELVAAGMTPDHDGYAAVVGASKA |
2CX9 Chain:A ((39-380)) | ----------------------------------FPWDLVRKLAEFGVFGA-LVPEAYGGAGLSTRLFARMVEAIAYYDGALA-----LTVASHNSLATGHILLAGSEAQKEAFLPKLASGEALGAWGLTEPGSGSDAAALKTKAEKVEGGWRLNGTKQFITQGSVAGVYVVMARTDPPPSPERKHQGISAFAFFRPERGLKVGRKEEKLGLTASDTAQLILEDLFVPEEALLGERGKGFYDVLRVLDGGRIGIAAMAVGLGQAALDYALAYAKGREAFGRPIAEFEGVSFKLAEAATELEAARLLYLKAAELKDAGRPFTLEAAQAKLFASEAAVKACDEAIQILGGYGYVKD-YPVERYWRDARLTRIGEGTSEILKLVIA------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2CX9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -231923 for 2902 contacts (-79.9/contact) +
2D Compatibility (PS) -36119 + (NN) -19989 + (LL) 3748
1D Compatibility (HY) -14000 + (ID) 4750
Total energy: -303033.0 ( -104.42 by residue)
QMean score : 0.448
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