Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKPTSAGQADDALVRLARERFDLPDQVRRLARPPVPSLEPPYGLRVAQLTDAEMLAEWMNRPHLAAAWEYDWPASRWRQHLNAQLEGTYSLPLIGSWHGTDGGYLELYWAAKDLISHYYDADPYDLGLHAAIADLSKVNRGFGPLLLPRIVASVFANEPRCRRIMFDPDHRNTATRRLCEWAGCKFLGEHDTTNRRMALYALEAPTTAA
2QML Chain:A ((16-188))
------------------------------------HVVNKKLSFRHVTMDDVDMLHSWMHEEHVIPYWKLNIPLVDYKKHLQTFLNDDHQTLMVGAINGVPMSYWESYWVKEDIIANYYPFEEHDQGIHLLIGPQEYLGQGLIYPLLLAIMQQKF-QEPDTNTIVAEPDRRNKKMIHVFKKCGFQPVKEVELPDKIGLLMKCEQNVFEK
General information:
TITO was launched using:
RESULT:
Template:
2QML.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -107480 for 1281 contacts (-83.9/contact) +
2D Compatibility (PS) -18402 + (NN) -7268 + (LL) 2532
1D Compatibility (HY) -12000 + (ID) 2100
Total energy: -144718.0 ( -112.97 by residue)
QMean score : 0.441
(partial model without unconserved sides chains):
PDB file :
Tito_2QML.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QML-query.scw
PDB file :
Tito_Scwrl_2QML.pdb
: