Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSVGEGPDTKPTARGQPAAVGRVVVLSGPSAVGKSTVVRCLRERIP--NLHFSVSATTRAPRPGEVDGVDYHFIDPTRFQQLIDQGELLEWAEIHGGLHRSGTLAQPVRAAAATGVPVLIEVDLAGARAIKKTMPEAVTVFLAPPSWQDLQARLIGRGTETADVIQRRLDTARIELAAQGDFDKVVVNRRLESACAELVSLLVGTAPGSP
2ANC Chain:A ((2-183))
------------------AQGTLYIVSAPSGAGKSSLIQALLKTQPLYDTQVSVSHTTRQPRPGEVHGEHYFFVNHDEFKEMISRDAFLEHAEVFGNYY--GTSREAIEQVLATGVDVFLDIDWQGAQQIRQKMPHARSIFILPPSKIELDRRLRGRGQDSEEVIAKRMAQAVAEMSHYAEYDYLIVNDDFDTALTDLKTII--------
General information:
TITO was launched using:
RESULT:
Template:
2ANC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -100140 for 1286 contacts (-77.9/contact) +
2D Compatibility (PS) -20449 + (NN) -10488 + (LL) -52
1D Compatibility (HY) -13600 + (ID) 3300
Total energy: -148029.0 ( -115.11 by residue)
QMean score : 0.590
(partial model without unconserved sides chains):
PDB file :
Tito_2ANC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ANC-query.scw
PDB file :
Tito_Scwrl_2ANC.pdb
: