Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRTPRRHCRRIAVLAAVSIAATVVAGCSSGSKPSGGPLPDAKPLVEEATAQTKALKSAHMVLTVNGKIPGLSLKTLSGDLTTNPTAATGNVKLTLGGSDIDADFVVFDGILYATLTP-NQWSDFGPAADIYDPAQVLNPDTGLANVLANFADAKAEGRDTINGQNTIRISGKVSAQAVNQIAPPFNATQPVPATVWIQETGDHQLAQAQLDRG-SGNSVQMTLSKWGEKVQVTKPPVS
3M4W Chain:A ((2-177))--------------------------------------PASGALLQQMNLASQS-LNYELSFISINK--QG-VESLRYRHARLDNRPLAQLLQM-DG--PRREVVQRGNEISYFEPGLEPFT-LNGDYI-VDSLPSLIY-TDFKRLSPY-YDFISVGRTRIADRLCEVIRVVARDG------------TRYSYIVWMDTES-KLPMRVDLLDRDGETLEQFRVIAFNVNQD-------


General information:
TITO was launched using:
RESULT:

Template: 3M4W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9080 for 1192 contacts (-7.6/contact) +
2D Compatibility (PS) -17588 + (NN) -3515 + (LL) 3452
1D Compatibility (HY) -3200 + (ID) 900
Total energy: -30831.0 ( -25.86 by residue)
QMean score : 0.195

(partial model without unconserved sides chains):
PDB file : Tito_3M4W.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3M4W-query.scw
PDB file : Tito_Scwrl_3M4W.pdb: