Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTEFDDIKNLSLPETRDAAKQLLDSVAGDLTGEAAQRFQALTRHAEELRAEQRRRGREAEEALRRYRAGELRVVPGAPTGGDDGDAPPGNSLRDTAFRTLDSCVRDGLMSSRAAETAETLCRTGPPQSTSWAQRWLAATGSRDYLGAFVKRVSNPVAGHTVWTDREAAAWREAAAVAAEQRAMGLVDTQGGFLIPAALDPAILLSGDGSTNPIRQVARVVQTTSE-I--WRGVTSEGAEARWYSEAQEVSD-DSPALAQPAVPNYRG-SCWIPFSIELEGDA-ASFVGEIGKILADSVEQLQAAAFVNGSGN----G-EPTGFVSALTGTSDQVVVGAGSEAIVAADVYALQSALPPRFQ--ASAAFAANLSTINTLRQAET---SNGALK-FP-SLHD-S-PPMLAGKSVLEVSHMDTVDSAVT-----AT----------NHPLVLGDWKQFLIGDRVGSMVELV-PHLFGPNRRPTGQRGFFAWFRVGSDVLVRNAFRVLKVETTA |
| 4BML Chain:A ((24-331)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VRYATALKLFSGEVF-TAFNNASIFKGLVRSYDLRGGKSKQFMFTGK--LSAGYHTPGTPIVGDAGIKANEKTLVMDDLLVSSQFVYSLDEIFSQYSTRAEVSKQIGEALATHYDERIARVLAKASAEASPVTGEPGGFHVNI--GAGNTNDAQAIVDGFFEAAAVLDERSAPQEGRVAVLSPRQYYSLISSVDTNILNREIGNSQGDMNSGKGLYSIAGIRILKSNNLAGLYGQDLSSAAVTGENNDYQVDASALAGLIFHREAAGCIQSVAPTIQTTSGDFNV----QYQGDLIVGKLAMGCGSLRTSVAGSFQA---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BML.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -66530 for 28441 contacts (-2.3/contact) +
2D Compatibility (PS) -24173 + (NN) 4812 + (LL) 11924
1D Compatibility (HY) 11200 + (ID) 650
Total energy: -63417.0 ( -2.23 by residue)
QMean score : ?
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