Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTQAATRPTNDAGQDGGNNSDILVVARQQVLQRGEGLNQDQVLAVLQLPDDRLEELLALAHEVRMRWCGPEVEVEGIISLKTGGCPEDCHFCSQSGLFA--SPVRSAWLDIPSLVEAAKQTAKSGATEFCIVAAVRGPDERLMAQVAAGIEAIRNEVEINIACSLGMLTAEQVDQLAARGVHRYNHNLETARSFFANVVTTHT-WEERWQTLSMVRDAGMEVCCGGILGM-GETLQQRAEFAAELAELGPDEVPLNFLNPRPGTPFADLEVMPVGDALKAVAAFRLALPRTMLR--------FAGGREITLGDLGAKRGILGGINAVIVGNYLTTLGRPAEADLELLDELQMPLKALNASL |
5FEX Chain:A ((43-293)) | -----------------------------------------------------EALFKLADEIRRKYVGDEVHIRAIIEF-SNVCRKNCLYC---GLRRDNKNLKRYRMTPEEIVERARLAVQFGAKTIVLQS---GEDPY-MPDVISDIVKEIKKMGVAVTLSLGEWPREYYEKWKEAGADRYLLRHETANPVLHRKLRPDTSFENRLNCLLTLKELGYETGAGSMVGLPGQTIDDLVDDLLFLKEHDFDMVGIGPFIPHPDTPLANEKKGDFTLTLKMVALTRILLPDSNIPATTAMGTIVPGGREITL-------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5FEX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -135633 for 1828 contacts (-74.2/contact) +
2D Compatibility (PS) -26890 + (NN) -21069 + (LL) 6720
1D Compatibility (HY) -15600 + (ID) 3450
Total energy: -195922.0 ( -107.18 by residue)
QMean score : 0.516
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