Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTHSRLIGALTVVAIIVTACGSQPKSQPAVAPTGDAAAATQVPAGQTVPAQLQFSAKTLDGHDFHGESLLGKPAVLWFWAPWCPTCQGEAPVVGQVA--ASHPEVTFVGVA-GLDQVPAMQEFVNKYP---VKTFTQLADTDGSVWANFGVTQQPAYAFVDPHGN-VDVVRGRMSQDELTRRVTALTSR
4HQS Chain:A ((55-189))
------------------------------------------------A---DFELMGVDGKTYRLSDYKGKKVYLKFWASWCSICLASLPDTDEIAKEAGDDYVVLTVVSPGHKGEQSEADFKNWYKGLDYKNLPVLVDPSGKLLETYGVRSYPTQAFIDKEGKLVKTHPGFMEKDAILQTLKEL---
General information:
TITO was launched using:
RESULT:
Template:
4HQS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -82289 for 945 contacts (-87.1/contact) +
2D Compatibility (PS) -13639 + (NN) -2550 + (LL) 3976
1D Compatibility (HY) -7600 + (ID) 1850
Total energy: -103952.0 ( -110.00 by residue)
QMean score : 0.602
(partial model without unconserved sides chains):
PDB file :
Tito_4HQS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4HQS-query.scw
PDB file :
Tito_Scwrl_4HQS.pdb
: