Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRRSPKGSPGAVLDLQRRVDQAVSADHAELMTIAKDANTFFGAESVQDPYPLYERMRAAGSVHRIAN---SDFYAVCGWDAVNEAIGRPEDFSSNLTATMTYTAEGTAKPFEMDPLGGPTHVLATADDPAHAVHRKLVLRHLAAKRIRVMEQFTVQAADRLWVDGM---QDGCIEWMGAMANRLPMMVVAELIGLPDPDIAQLVKWGYAATQLLEGLVENDQLVAAGVALMELSGYIFEQFDRAAADPRDNLLGELA-TACASGELDTLTAQVMMV-TLFAAGGESTAALLGSAVWILATRPDIQQQVRANPELLGAFIEETLRYEPPFRG-HYRHVRNATTLDGTELPADSHLLLLWGAANRDPAQFEAPGEFRLDRAGGKGHISFGKGAHFCVGAALARLEARIVLRLLLDRTSVIEAADVGG----WLPSILVRRIERLELAVQ |
2CD8 Chain:A ((40-423)) | ----------------------------------------LGQDFAADPYPTYARLRAEGPAHRVRTPEGDEVWLVVGYDRARAVLADPR-FSKDWRNSTTPLTEAEA---------ALNHNMLESDPPRHTRLRKLVAREFTMRRVELLRPRVQEIVDGL-VDAMLAAPDGRADLMESLAWPLPITVISELLGVPEPDRAAFRVW-------TDAFVFPDDPAQAQTAMAEMSGYLSRLIDSKRGQDGEDLLSALVRTSDEDGSRLTSEELLGMAHILLVAGHETTVNLIANGMYALLSHPDQLAALRADMTLLDGAVEEMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFPDPHRFDI-RRDTAGHLAFGHGIHFCIGAPLARLEARIAVRALLERCPDL-ALDVSPGELVWYPNPMIRGLKALPI--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2CD8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -251776 for 3061 contacts (-82.3/contact) +
2D Compatibility (PS) -40181 + (NN) -22344 + (LL) 3924
1D Compatibility (HY) -22800 + (ID) 6600
Total energy: -339777.0 ( -111.00 by residue)
QMean score : 0.472
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