Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRRSPKGSPGAVLDLQRRVDQAVSADHAELMTIAKDANTFFGAESVQDPYPLYERMRAAGSVHRIAN---SDFYAVCGWDAVNEAIGRPEDFSSNLTATMTYTAEGTAKPFEMDPLGGPTHVLATADDPAHAVHRKLVLRHLAAKRIRVMEQFTVQAADRLWVDGM---QDGCIEWMGAMANRLPMMVVAELIGLPDPDIAQLVKWGYAATQLLEGLVENDQLVAAGVALMELSGYIFEQFDRAAADPRDNLLGELA-TACASGELDTLTAQVMMV-TLFAAGGESTAALLGSAVWILATRPDIQQQVRANPELLGAFIEETLRYEPPFRG-HYRHVRNATTLDGTELPADSHLLLLWGAANRDPAQFEAPGEFRLDRAGGKGHISFGKGAHFCVGAALARLEARIVLRLLLDRTSVIEAADVGG----WLPSILVRRIERLELAVQ
2CD8 Chain:A ((40-423))----------------------------------------LGQDFAADPYPTYARLRAEGPAHRVRTPEGDEVWLVVGYDRARAVLADPR-FSKDWRNSTTPLTEAEA---------ALNHNMLESDPPRHTRLRKLVAREFTMRRVELLRPRVQEIVDGL-VDAMLAAPDGRADLMESLAWPLPITVISELLGVPEPDRAAFRVW-------TDAFVFPDDPAQAQTAMAEMSGYLSRLIDSKRGQDGEDLLSALVRTSDEDGSRLTSEELLGMAHILLVAGHETTVNLIANGMYALLSHPDQLAALRADMTLLDGAVEEMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFPDPHRFDI-RRDTAGHLAFGHGIHFCIGAPLARLEARIAVRALLERCPDL-ALDVSPGELVWYPNPMIRGLKALPI---


General information:
TITO was launched using:
RESULT:

Template: 2CD8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -251776 for 3061 contacts (-82.3/contact) +
2D Compatibility (PS) -40181 + (NN) -22344 + (LL) 3924
1D Compatibility (HY) -22800 + (ID) 6600
Total energy: -339777.0 ( -111.00 by residue)
QMean score : 0.472

(partial model without unconserved sides chains):
PDB file : Tito_2CD8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2CD8-query.scw
PDB file : Tito_Scwrl_2CD8.pdb: