Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTRVVVIGSGFAGLWAALGAARR------LDELAVLAGT-VDVMVVSNKPFHDIRVRNYEAD--LSACRIPLGDVLGPAGVAH----VTAEVTAID------------------ADGRRVTTSTGASYSYDRLVLASGSHVVKPALPGLAEFGFDVDTYDGAVRLQQHLQGLAGGPLTSAAATVVVVGAGLTGIETACELPGRLHALFARGDGVTPRVVLIDHNPFVGSDMGLSARPVIEQALLDNGVETRTGVSVAAVSPGG----VTLSSGERLAAATVVWCAGMRASRLTEQLPV-----ARDRLGRLQVDDYLRVIGVPAMFAAGDVAAARMDDEHLSVMSCQHGRPMGRYAGCNVINDLFDQPLLALRIPWYVTVLDLGSAGAVYTEGWERKVVSQGAPAKTTKQSINTRRIYPPLNGSRADLLAAAAPRVQPRP |
| 2YQU Chain:A ((1-303)) | MYDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKALGGTCLRVGCIPSKALLETTERIYEAKKGLLGAKVKGVELDLPALMAHKDKVVQANTQGVEFLFKKNGIARHQGTARFLSERKVLVEETGEELEARYILIATGS---APLIPPWAQVDYE--------RVVTSTEALS---FPEVPKRLIVVGGGVIGLELGV----VWHRLGAE-------VIVLEYMDRILPTMDLEVSRAAERVFKKQGLTIRTGVRVTAVVPEAKGARVELEGGEVLEADRVLVAVGRRP--YTEGLSLENAGLSTDERGRIPVDEHLRT-RVPHIYAIGDV------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YQU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -173068 for 1972 contacts (-87.8/contact) +
2D Compatibility (PS) -27075 + (NN) 3823 + (LL) 6868
1D Compatibility (HY) -19600 + (ID) 4150
Total energy: -213202.0 ( -108.11 by residue)
QMean score : 0.354
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