Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLHDRLTGAPRGATGDEGAANAHITRAMVAALTSVATQIKTLDAQIAEQLSLHADAHIFTSLPRSGTVRAARLLAEIGDCRARFPTPESLACLAGVAPSTRQSGKVKHVGFRWAADKQLRDAVCDFAGDSRRANLWAADRYNRAIARGHDHPHAVRILARAWLYAIWHCWQDGAAYHPANHRALQALLNQDQDRAA
2EDU Chain:A ((39-81))
-------------------------------------------------------ARDLRSLQRIGPKKAQLIVGWREL-HGPFSQVEDLERVEGITGK-------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2EDU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -13863 for 228 contacts (-60.8/contact) +
2D Compatibility (PS) -4691 + (NN) -3806 + (LL) 11556
1D Compatibility (HY) -1600 + (ID) 500
Total energy: -12904.0 ( -56.60 by residue)
QMean score : 0.677
(partial model without unconserved sides chains):
PDB file :
Tito_2EDU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2EDU-query.scw
PDB file :
Tito_Scwrl_2EDU.pdb
: