Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTRPRTDAIHHHVVVNAPIERAFAVFTTR--FGDFKPREHNLLAIPITETVFECHAGGHIYDRGV--DGS-VCKWARVLVYEPPSRVLFTWDIGPTWRPETDLAKTSEVEVRFTAQSAETTRVDLEHRHLDRHG---PG------WESVADGVDSEAGWPLYLRRYTDLLCIQVQP
2IL5 Chain:A ((12-170))
----EHVEVEIEKLYKFSPELVYEAWTKKDLLKQWFMT-SAR---TNKEIEADVKEGGKYRIVDQQRNGKVNVIEGIYESLVMDEYVKMTIGMP--------SETQDVIEVEFFERETGGTQMLFYYRSLVEKERRFTNLEYKQKKKEYHDAM--VHGFELMFDKMYHVIETSTQ-
General information:
TITO was launched using:
RESULT:
Template:
2IL5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -56746 for 983 contacts (-57.7/contact) +
2D Compatibility (PS) -15348 + (NN) -3685 + (LL) 712
1D Compatibility (HY) -4800 + (ID) 900
Total energy: -80767.0 ( -82.16 by residue)
QMean score : 0.298
(partial model without unconserved sides chains):
PDB file :
Tito_2IL5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2IL5-query.scw
PDB file :
Tito_Scwrl_2IL5.pdb
: