Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MADRVLRGSRLGAVSYETDRNHDLAPRQIARYRTD-NGEEFEVPFAD----------DAEIPGTWLCR-NGMEGTLIEGDLPEPKKVKPPRTHWDMLLERRSIEELEELLKERLELIRSRRRG
4RXN Chain:A ((2-46))
-----------------------------KKYTCTVCGYIYDPEDGDPDDGVNPGTDFKDIPDDWVCPLCGVGK-------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4RXN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1066 for 153 contacts (-7.0/contact) +
2D Compatibility (PS) -3458 + (NN) -2142 + (LL) 5600
1D Compatibility (HY) -2000 + (ID) 400
Total energy: -3466.0 ( -22.65 by residue)
QMean score : 0.029
(partial model without unconserved sides chains):
PDB file :
Tito_4RXN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4RXN-query.scw
PDB file :
Tito_Scwrl_4RXN.pdb
: