Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAMVNTTTRLSDDALAFLSERHLAMLTTLRADNSPHVVAVGFTFDPKTHIARVITTGGSQKAVNADRSGLAVLSQVDG--ARWLSLEGRAAVNSDIDAVRDAELRYAQRYRTP-RPNPRRVVIEVQIERVLGSADLLDRA
2I02 Chain:A ((6-139))
----TDRTQEIQKLHELIKNIDYGMFTTVDDDGSLHSYPMSKSGD--EATLWFFTYAGSHKVTEIEHHEQVNVSFSSPEQQRYVSISGTSQLVKDRNKMRELWKPELQTWFPKGLDEPDIALLKVNINQVNYWDSTS---
General information:
TITO was launched using:
RESULT:
Template:
2I02.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40175 for 863 contacts (-46.6/contact) +
2D Compatibility (PS) -14221 + (NN) -4979 + (LL) 844
1D Compatibility (HY) -2000 + (ID) 1150
Total energy: -61681.0 ( -71.47 by residue)
QMean score : 0.416
(partial model without unconserved sides chains):
PDB file :
Tito_2I02.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2I02-query.scw
PDB file :
Tito_Scwrl_2I02.pdb
: