Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAQEQTKRGGGGGDDDDIAGSTAAGQERREKLTEETDDLLDEIDDVLEENAEDFVRAYVQKGGQ
3NC3 Chain:A ((124-165))
--------------------------KRRIVVRSFIGDALDHLSPLIKQNAENLLAPYLERG--
General information:
TITO was launched using:
RESULT:
Template:
3NC3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1292 for 143 contacts (9.0/contact) +
2D Compatibility (PS) -3716 + (NN) 288 + (LL) 132
1D Compatibility (HY) -3200 + (ID) 500
Total energy: -5704.0 ( -39.89 by residue)
QMean score : 0.495
(partial model without unconserved sides chains):
PDB file :
Tito_3NC3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3NC3-query.scw
PDB file :
Tito_Scwrl_3NC3.pdb
: