Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGQIVAGEIGGQRTTPVGGGLPLACCLDGRPPIVPHRRRRRIAALRSVLRMRDTPRPARSRCDQVTSHAVLIGWRAVPRRHGGELPRRGALALGCIALLLMGIVGCTTVTDGTAMPDTNVAPAYRSSVSASVSASAATSSIRESQRQQSLTTKAIRTSCDALAATSKDAIDKVNAYVAAFNQGRNTGPTEGPAIDALNNSASTVSGS----LSAALSAQLGDALNAYVDAARAVANAIGAHASTAEFNRRVDRLNDTKTKALTMCVAAF |
| 4JRF Chain:A ((98-199)) | -------------------------------------------------------------------------------------------------------------------------PSATAKVLAVVNPSDKFKTACVASASWSAINGAVEQTLDEVTGTSKNNFMMINA-------GDNANPTNGALVTA---NVKVVDGTTIPDVATAISEAQADRSMIYVD--RVVA---------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JRF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 269 for 526 contacts (0.5/contact) +
2D Compatibility (PS) -10277 + (NN) -4085 + (LL) 10444
1D Compatibility (HY) -3600 + (ID) 1500
Total energy: -8749.0 ( -16.63 by residue)
QMean score : 0.158
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