Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MANIKSQQKRNRTNERARLRNKAVKSSLRTAVRAFREAAHAGDKAKAAELLASTNRKLDKAASKGVIHKNQAANKKSALAQALNKL
2F4V Chain:T ((14-91))
--------KRHRQSLKRRLRNKAKKSAIKTLSKKAVQLAQEGKAEEALKIMRKAESLIDKAAKGSTLHKNAAARRKSRLMRKVRQL
General information:
TITO was launched using:
RESULT:
Template:
2F4V.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3478 for 499 contacts (7.0/contact) +
2D Compatibility (PS) -8763 + (NN) -5275 + (LL) 752
1D Compatibility (HY) -2000 + (ID) 1400
Total energy: -13208.0 ( -26.47 by residue)
QMean score : 0.876
(partial model without unconserved sides chains):
PDB file :
Tito_2F4V.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2F4V-query.scw
PDB file :
Tito_Scwrl_2F4V.pdb
: