Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSVSRRDVLKFAAATPGVLGLGVVASSLRAAPASAGSLGTLLDYAAGV--IPASQIRAAGAVGAIRYVSDRRPGGAWMLGKPIQLSEARDLSGNGLKIVSCYQYGKGSTADWLGGASAGVQHARRGSELHAAAGG-PTSAPIYASIDDNPS--YEQYKNQIVPYLRSWESVIGHQRTGVYANSKTIDWAVNDGL-GSYFWQHNWGSP-KGYT--HPAAHLHQVEIDKRKVGGV--GVDVNQILKPQFGQWA |
4KRT Chain:A ((17-209)) | -----------------------------------NNNLKGIDVSNWKGNINFESVKNDGVEVVYIKATEGNY-----FKDKYAKQNYEGAKEQGLSV-GFYHFFRAN--------KGAKDQANFFIDYLNEIGAVNYDCKLALDIETTEGVGVRDLTSMCIEFLEEVKRL-TGKEVVVYTYTSFANNNLDSRLGNYPVWIAHYGVNTPGANNIWSSWVGFQYSEN-GSVAGVNGGCDMNEFTE------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4KRT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -49405 for 1487 contacts (-33.2/contact) +
2D Compatibility (PS) -19660 + (NN) -9276 + (LL) 3796
1D Compatibility (HY) -7600 + (ID) 1150
Total energy: -83295.0 ( -56.02 by residue)
QMean score : 0.454
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