Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLRWITAGESHGRALVAVVEGMVAGVHVTSADIADQLARRRLGYGRGARMTF-----ERDAVTVLSGIRHGSTLGGPIAIEIGNTEWPKWETVMAADPVDPAELADVARNAPLTRPRPGHADYAGMLKYGFDDARPVLERASARETAARVAAGTVARAFLRQALGVEVLSHVISIGASAPYEGPPPRAEDLPAIDASPVRAYDKAAEADMIAQIEAAKKDGDTLGGV--VEAVAL----GLPVGLGSFTSGDHRLDSQLAAAVMGIQAIKGVEIGDGFQTARRRGSRAHDEMYPGPDGVVRSTNRAGGLEGGMTNGQPLRVRAAMKPISTVPRALATVDLATGDEAVAIHQRSDVCAVPAAGVVVETMVALVLARAALEKFGGDSLAETQRNIAAYQRSVADREAPAARVSG |
1UMF Chain:A ((7-348)) | FLRLTTFGESHGDVIGGVLDGMPSGIKIDYALLENEMKRR-----QGGRNVFITPRKEDDKVEITSGVFEDFSTGTPIGFLIHNQR---------ARSKDYDNIKNLF--------RPSHADFTYFHKYGIRDFRGG-GRSSARESAIRVAAGAFAKMLLRE-IGIVCESGIIEIG------GIKAKNYDFNHALKSEIFALDEEQEEAQKTAIQNAIKNHDSIGGVALIRARSIKTNQKLPIGLGQGLYA--KLDAKIAEAMMGLNGVKAVEIGKGVESSLLKGSEYNDLM----DQKGFLSNRSGGVLGGMSNGEEIIVRVHFKPTPSIFQPQRTIDINGNECECLLKGRHDPCIAIRGSVVCESLLALVLADMVL---------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1UMF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -131777 for 2648 contacts (-49.8/contact) +
2D Compatibility (PS) -35371 + (NN) -10439 + (LL) 3508
1D Compatibility (HY) -21600 + (ID) 6100
Total energy: -201779.0 ( -76.20 by residue)
QMean score : 0.378
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