Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNELVDTTEMYLRTIYDLEEEGVTPLRARIAERLDQSGPTVSQTVSRMERDGLLRVAGDRHLELTEKGRALAIAVMRKHRLAERLLVDVIGLPWEEVHAEACRWEHVMSEDVERRLVKVLNNPTTSPFGNPIPGLVELGVGPEPGADDANLVRLTELPAGSPVAVVVRQLTEHVQGDIDLITRLKDAGVVPNARVTVETTPGGGVTIVIPGHENVTLPHEMAHAVKVEKV
1G3S Chain:A ((4-225))
---LVDTTEMYLRTIYELEEEGVTPLRARIAERLEQSGPTVSQTVARMERDGLVVVASDRSLQMTPTGRTLATAVMRKHRLAERLLTDIIGLDINKVHDEASRWEHVMSDEVERRLVKVLKDVSRSPFGNPIPGLDELGV---------PGTRVIDAATSMPRKVRIVQINEIFQVETDQFTQLLDADIRVGSEVEI-VD---HITLSHNG-KDVELLDDLAHTIRIEE-
General information:
TITO was launched using:
RESULT:
Template:
1G3S.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -114700 for 1570 contacts (-73.1/contact) +
2D Compatibility (PS) -23273 + (NN) -11419 + (LL) -296
1D Compatibility (HY) -18800 + (ID) 6400
Total energy: -174888.0 ( -111.39 by residue)
QMean score : 0.701
(partial model without unconserved sides chains):
PDB file :
Tito_1G3S.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1G3S-query.scw
PDB file :
Tito_Scwrl_1G3S.pdb
: