Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNEALIGLAFAAGLVAALNPCGFAMLPAYLLLVVYGQDSAGRTGPLSAVGRAAAATVGMALGFLTVFGIFGALTISAATAVQRYLPYATVLIGLALIALGGWLLLGRGLTALTPRSLGVRWAPTVRLGSMYGYGISYAVASLSCTIGPFLAVTGAGLRGGSVVGSVAIYLAYVAGLTLVVGVLAVAAATASSALADRLRRILPFVNRISGALLVVVGLYVGYYGLYELRLIAGVGANPQDAVIAAAGRLQGALAGWVNQHGAWPWAVLLVVLVVGAFAGTWFRRVRR |
| 3MIV Chain:B ((29-85)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VKIFSGDVVDAVDVTFTYYGKTETRHFGGSGGTPHEIVLQEGEYLVGMKGEFGNYHG-------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MIV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -16527 for 258 contacts (-64.1/contact) +
2D Compatibility (PS) -5816 + (NN) 1913 + (LL) 18632
1D Compatibility (HY) -1600 + (ID) 900
Total energy: -4298.0 ( -16.66 by residue)
QMean score : -0.190
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